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Hu, Yao; Bien, Stephanie A.; Nishimura, Katherine K.; Haessler, Jeffrey; Hodonsky, Chani J.; Baldassari, Antoine R.; Highland, Heather M.; Wang, Zhe; Preuss, Michael; Sitlani, Colleen M.; Wojcik, Genevieve L.; Tao, Ran; Graff, Mariaelisa; Huckins, Laura M.; Sun, Quan; Chen, Ming-Huei; Mousas, Abdou; Auer, Paul L.; Lettre, Guillaume; Kooperberg, Charles — 2021 Additional file 1. https://creativecommons.org/licenses/by/4.0/legalcode

Morra, Anna; Escala-Garcia, Maria; Beesley, Jonathan; Keeman, Renske; Canisius, Sander; Ahearn, Thomas U.; Andrulis, Irene L.; Anton-Culver, Hoda; Arndt, Volker; Auer, Paul L.; Augustinsson, Annelie; Beane Freeman, Laura E.; Becher, Heiko; Beckmann, Matthias W.; Behrens, Sabine; Bojesen, Stig E.; Bolla, Manjeet K.; Brenner, Hermann; Brüning, Thomas; Buys, Saundra S.; Caan, Bette; Campa, Daniele; Canzian, Federico; Castelao, Jose E.; Chang-Claude, Jenny; Chanock, Stephen J.; Cheng, Ting-Yuan David; Clarke, Christine L.; Colonna, Sarah V.; Couch, Fergus J.; Cox, Angela; Cross, Simon S.; Czene, Kamila; Daly, Mary B.; Dennis, Joe; Dörk, Thilo; Dossus, Laure; Dunning, Alison M.; Dwek, Miriam; Eccles, Diana M.; Ekici, Arif B.; Eliassen, A. Heather; Eriksson, Mikael; Evans, D. Gareth; Fasching, Peter A.; Flyger, Henrik; Fritschi, Lin; Gago-Dominguez, Manuela; García-Sáenz, José A.; Giles, Graham G.; Grip, Mervi; Guénel, Pascal; Gündert, Melanie; Hahnen, Eric; Haiman, Christopher A.; Håkansson, Niclas; Hall, Per; Hamann, Ute; Hart, Steven N.; Hartikainen, Jaana M.; Hartmann, Arndt; He, Wei; Hooning, Maartje J.; Hoppe, Reiner; Hopper, John L.; Howell, Anthony; Hunter, David J.; Jager, Agnes; Jakubowska, Anna; Janni, Wolfgang; John, Esther M.; Jung, Audrey Y.; Kaaks, Rudolf; Keupers, Machteld; Kitahara, Cari M.; Koutros, Stella; Kraft, Peter; Kristensen, Vessela N.; Kurian, Allison W.; Lacey, James V.; Lambrechts, Diether; Le Marchand, Loic; Lindblom, Annika; Linet, Martha; Luben, Robert N.; Lubiński, Jan; Lush, Michael; Mannermaa, Arto; Manoochehri, Mehdi; Margolin, Sara; Martens, John W. M.; Martinez, Maria Elena; Mavroudis, Dimitrios; Michailidou, Kyriaki; Milne, Roger L.; Mulligan, Anna Marie; Muranen, Taru A.; Nevanlinna, Heli; Newman, William G.; Nielsen, Sune F.; Nordestgaard, Børge G.; Olshan, Andrew F.; Olsson, Håkan; Orr, Nick; Park-Simon, Tjoung-Won; Patel, Alpa V.; Peissel, Bernard; Peterlongo, Paolo; Plaseska-Karanfilska, Dijana; Prajzendanc, Karolina; Prentice, Ross; Presneau, Nadege; Rack, Brigitte; Rennert, Gad; Rennert, Hedy S.; Rhenius, Valerie; Romero, Atocha; Roylance, Rebecca; Ruebner, Matthias; Saloustros, Emmanouil; Sawyer, Elinor J.; Schmutzler, Rita K.; Schneeweiss, Andreas; Scott, Christopher; Shah, Mitul; Smichkoska, Snezhana; Southey, Melissa C.; Stone, Jennifer; Surowy, Harald; Swerdlow, Anthony J.; Tamimi, Rulla M.; Tapper, William J.; Teras, Lauren R.; Terry, Mary Beth; Tollenaar, Rob A. E. M.; Tomlinson, Ian; Troester, Melissa A.; Truong, Thérèse; Vachon, Celine M.; Wang, Qin; Hurson, Amber N.; Winqvist, Robert; Wolk, Alicja; Ziogas, Argyrios; Brauch, Hiltrud; García-Closas, Montserrat; Pharoah, Paul D. P.; Easton, Douglas F.; Chenevix-Trench, Georgia; Schmidt, Marjanka K. — 2021 Additional file 1: Supplementary Table S1, Supplementary Table S2, Supplementary Table S3, and Supplementary Table S4. Supplementary Table S1. Shows an overview of the Breast Cancer Association Consortium studies included in the analyses. Supplementary Table S2. Includes the rationale and references to the literature supporting the choice of each subgroup for inclusion in a genome-wide association study on breast cancer-specific survival. Supplementary Table S3. Shows the characteristics of the breast cancer patients included in the 15-year breast cancer-specific survival analyses, overall and by subgroup. Supplementary Table S4. Shows the characteristics of the breast cancer patients included in the 5-year breast cancer-specific survival analyses for subgroups defined based on type of systemic treatment received. https://creativecommons.org/licenses/by/4.0/legalcode

Morra, Anna; Escala-Garcia, Maria; Beesley, Jonathan; Keeman, Renske; Canisius, Sander; Ahearn, Thomas U.; Andrulis, Irene L.; Anton-Culver, Hoda; Arndt, Volker; Auer, Paul L.; Augustinsson, Annelie; Beane Freeman, Laura E.; Becher, Heiko; Beckmann, Matthias W.; Behrens, Sabine; Bojesen, Stig E.; Bolla, Manjeet K.; Brenner, Hermann; Brüning, Thomas; Buys, Saundra S.; Caan, Bette; Campa, Daniele; Canzian, Federico; Castelao, Jose E.; Chang-Claude, Jenny; Chanock, Stephen J.; Cheng, Ting-Yuan David; Clarke, Christine L.; Colonna, Sarah V.; Couch, Fergus J.; Cox, Angela; Cross, Simon S.; Czene, Kamila; Daly, Mary B.; Dennis, Joe; Dörk, Thilo; Dossus, Laure; Dunning, Alison M.; Dwek, Miriam; Eccles, Diana M.; Ekici, Arif B.; Eliassen, A. Heather; Eriksson, Mikael; Evans, D. Gareth; Fasching, Peter A.; Flyger, Henrik; Fritschi, Lin; Gago-Dominguez, Manuela; García-Sáenz, José A.; Giles, Graham G.; Grip, Mervi; Guénel, Pascal; Gündert, Melanie; Hahnen, Eric; Haiman, Christopher A.; Håkansson, Niclas; Hall, Per; Hamann, Ute; Hart, Steven N.; Hartikainen, Jaana M.; Hartmann, Arndt; He, Wei; Hooning, Maartje J.; Hoppe, Reiner; Hopper, John L.; Howell, Anthony; Hunter, David J.; Jager, Agnes; Jakubowska, Anna; Janni, Wolfgang; John, Esther M.; Jung, Audrey Y.; Kaaks, Rudolf; Keupers, Machteld; Kitahara, Cari M.; Koutros, Stella; Kraft, Peter; Kristensen, Vessela N.; Kurian, Allison W.; Lacey, James V.; Lambrechts, Diether; Le Marchand, Loic; Lindblom, Annika; Linet, Martha; Luben, Robert N.; Lubiński, Jan; Lush, Michael; Mannermaa, Arto; Manoochehri, Mehdi; Margolin, Sara; Martens, John W. M.; Martinez, Maria Elena; Mavroudis, Dimitrios; Michailidou, Kyriaki; Milne, Roger L.; Mulligan, Anna Marie; Muranen, Taru A.; Nevanlinna, Heli; Newman, William G.; Nielsen, Sune F.; Nordestgaard, Børge G.; Olshan, Andrew F.; Olsson, Håkan; Orr, Nick; Park-Simon, Tjoung-Won; Patel, Alpa V.; Peissel, Bernard; Peterlongo, Paolo; Plaseska-Karanfilska, Dijana; Prajzendanc, Karolina; Prentice, Ross; Presneau, Nadege; Rack, Brigitte; Rennert, Gad; Rennert, Hedy S.; Rhenius, Valerie; Romero, Atocha; Roylance, Rebecca; Ruebner, Matthias; Saloustros, Emmanouil; Sawyer, Elinor J.; Schmutzler, Rita K.; Schneeweiss, Andreas; Scott, Christopher; Shah, Mitul; Smichkoska, Snezhana; Southey, Melissa C.; Stone, Jennifer; Surowy, Harald; Swerdlow, Anthony J.; Tamimi, Rulla M.; Tapper, William J.; Teras, Lauren R.; Terry, Mary Beth; Tollenaar, Rob A. E. M.; Tomlinson, Ian; Troester, Melissa A.; Truong, Thérèse; Vachon, Celine M.; Wang, Qin; Hurson, Amber N.; Winqvist, Robert; Wolk, Alicja; Ziogas, Argyrios; Brauch, Hiltrud; García-Closas, Montserrat; Pharoah, Paul D. P.; Easton, Douglas F.; Chenevix-Trench, Georgia; Schmidt, Marjanka K. — 2021 Additional file 3: Supplementary Table S8, Supplementary Table S9, Supplementary Table S10, Supplementary Table S11, and Supplementary Table S12. Supplementary Table S8. Shows the BFDPs under two more restrictive prior probabilities of true association (10-5 and 10-6) for the results presented in Table 1. Supplementary Table S9. Shows the BFDPs under two more restrictive prior probabilities of true association (10-5 and 10-6) for the results presented in Table 2. Supplementary Table S10. Shows power calculation by subgroup, at the two-sided 5E-08 level for varying genotype hazard ratio (GHR) and minor allele frequency (MAF), based on number of cases and event rate from the 15-year breast cancer-specific analyses. Supplementary Table S11. Shows power calculation by subgroup, at the two-sided 5E-08 level for varying genotype hazard ratio (GHR) and minor allele frequency (MAF), based on number of cases and event rate from the 5-year breast cancer-specific analyses. Supplementary Table S12. Shows the subgroup-specific associations detected by previous studies and corresponding estimates from the current study. https://creativecommons.org/licenses/by/4.0/legalcode

Ahearn, Thomas U.; Zhang, Haoyu; Michailidou, Kyriaki; Milne, Roger L.; Bolla, Manjeet K.; Dennis, Joe; Dunning, Alison M.; Lush, Michael; Wang, Qin; Andrulis, Irene L.; Anton-Culver, Hoda; Arndt, Volker; Aronson, Kristan J.; Auer, Paul L.; Augustinsson, Annelie; Baten, Adinda; Becher, Heiko; Behrens, Sabine; Benitez, Javier; Bermisheva, Marina; Blomqvist, Carl; Bojesen, Stig E.; Bonanni, Bernardo; Børresen-Dale, Anne-Lise; Brauch, Hiltrud; Brenner, Hermann; Brooks-Wilson, Angela; Brüning, Thomas; Burwinkel, Barbara; Buys, Saundra S.; Canzian, Federico; Castelao, Jose E.; Chang-Claude, Jenny; Chanock, Stephen J.; Chenevix-Trench, Georgia; Clarke, Christine L.; Collée, J. Margriet; Cox, Angela; Cross, Simon S.; Czene, Kamila; Daly, Mary B.; Devilee, Peter; Dörk, Thilo; Dwek, Miriam; Eccles, Diana M.; Evans, D. Gareth; Fasching, Peter A.; Figueroa, Jonine; Floris, Giuseppe; Gago-Dominguez, Manuela; Gapstur, Susan M.; García-Sáenz, José A.; Gaudet, Mia M.; Giles, Graham G.; Goldberg, Mark S.; González-Neira, Anna; Alnæs, Grethe I. Grenaker; Grip, Mervi; Guénel, Pascal; Haiman, Christopher A.; Hall, Per; Hamann, Ute; Harkness, Elaine F.; Heemskerk-Gerritsen, Bernadette A. M.; Holleczek, Bernd; Hollestelle, Antoinette; Hooning, Maartje J.; Hoover, Robert N.; Hopper, John L.; Howell, Anthony; Jakimovska, Milena; Jakubowska, Anna; John, Esther M.; Jones, Michael E.; Jung, Audrey; Kaaks, Rudolf; Kauppila, Saila; Keeman, Renske; Khusnutdinova, Elza; Kitahara, Cari M.; Ko, Yon-Dschun; Koutros, Stella; Kristensen, Vessela N.; Krüger, Ute; Kubelka-Sabit, Katerina; Kurian, Allison W.; Kyriacou, Kyriacos; Lambrechts, Diether; Lee, Derrick G.; Lindblom, Annika; Linet, Martha; Lissowska, Jolanta; Llaneza, Ana; Lo, Wing-Yee; MacInnis, Robert J.; Mannermaa, Arto; Manoochehri, Mehdi; Margolin, Sara; Martinez, Maria Elena; McLean, Catriona; Meindl, Alfons; Menon, Usha; Nevanlinna, Heli; Newman, William G.; Nodora, Jesse; Offit, Kenneth; Olsson, Håkan; Orr, Nick; Park-Simon, Tjoung-Won; Patel, Alpa V.; Peto, Julian; Pita, Guillermo; Plaseska-Karanfilska, Dijana; Prentice, Ross; Punie, Kevin; Pylkäs, Katri; Radice, Paolo; Rennert, Gad; Romero, Atocha; Rüdiger, Thomas; Saloustros, Emmanouil; Sampson, Sarah; Sandler, Dale P.; Sawyer, Elinor J.; Schmutzler, Rita K.; Schoemaker, Minouk J.; Schöttker, Ben; Sherman, Mark E.; Shu, Xiao-Ou; Smichkoska, Snezhana; Southey, Melissa C.; Spinelli, John J.; Swerdlow, Anthony J.; Tamimi, Rulla M.; Tapper, William J.; Taylor, Jack A.; Teras, Lauren R.; Terry, Mary Beth; Torres, Diana; Troester, Melissa A.; Vachon, Celine M.; van Deurzen, Carolien H. M.; van Veen, Elke M.; Wagner, Philippe; Weinberg, Clarice R.; Wendt, Camilla; Wesseling, Jelle; Winqvist, Robert; Wolk, Alicja; Yang, Xiaohong R.; Zheng, Wei; Couch, Fergus J.; Simard, Jacques; Kraft, Peter; Easton, Douglas F.; Pharoah, Paul D. P.; Schmidt, Marjanka K.; García-Closas, Montserrat; Chatterjee, Nilanjan — 2022 Additional file 1. Figures S1 and S2 and Table S1-S4. This file contains supplementary figures 1-2 and supplementary tables 1-4. https://creativecommons.org/licenses/by/4.0/legalcode