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Ocean carbonate parameters on the Canadian Atlantic Continental Shelf
Federated Research Data Repository / dépôt fédéré de données de recherche
Cyr, Frédéric; Gibb, Olivia; Azetsu-Scott, Kumiko; Chassé, Joel; Galbraith, Peter S.; Maillet, Gary; Pepin, Pierre; Punshon, Stephen; Starr, Michel — 2022-12-23 This file contains 12923 lines, each corresponding to a discrete water collection from which ocean carbonate parameters were calculated and derived. Out of this number, 11890 contains the full suite of parameters derived using CO2sys, the remaining 1033 samples have only one of the three carbonate parameters (TA, TIC or pH) available.
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Depth-stratified abundance of Calanus spp. in the Northwest Atlantic (abundance per area)
PANGAEA
Johnson, Catherine L; Krumhansl, Kira A; Head, Erica J H; Pepin, Pierre; Plourde, Stéphane; Record, Nicholas R; Runge, Jeffrey A; Casault, Benoit — 2024 This dataset includes depth-stratified, stage-specific Calanus spp. abundance (C. finmarchicus, C. glacialis and C. hyperboreus copepodites and adults) collected on the Newfoundland and Labrador Shelves (NL), in the Gulf of St. Lawrence (GSL), on the Scotian Shelf (SS), and in the Gulf of Maine (GOM). The data were collected under a variety of programs and compiled to describe northwest-Atlantic-wide patterns of Calanus spp. vertical distribution and assess their environmental drivers. The dataset spans years 2001 and 2006 for NL, 1994-2009 for GSL, 1997-2011 for SS, and 1978, 1995-2007, and 2016 for GOM. Sampling and data processing methods are summarized in Krumhansl et al. (2018). Calanus spp. abundance data are reported for a total of 531 distinct sampling events and a total of 2574 stratified net samples. Zooplankton samples were collected using different gear types, including Multinet, BIONESS and MOCNESS, with several configurations of mouth opening area ranging from 0.25 to 1 m², and with several net mesh sizes ranging from 150 to 335 µm. Calanus spp. abundance is reported in individuals/m² and in individuals/m³ for each depth layer of the stratified tows. The dataset also includes environmental metrics (temperature, salinity and density), where available, collected concurrently with the zooplankton net tows as well as parameters derived from ocean color remote sensing data. Temperature, salinity and density metrics were derived from CTD profiles collected either simultaneously with the net tows or from the sampling event nearest to the net occupations and within ±0.2° latitude and longitude and ±3 days. For each net in a station occupation, environmental metrics include the mean, minimum, and maximum temperature, salinity, and density values. For each station, metrics include the 0-50 m mean and near-bottom temperature, salinity, and density, the minimum subsurface temperature and its depth, depths of the upper and lower boundary of the cold intermediate layer (CIL) and its thickness, and the water temperature at the bottom of the CIL. For NL (shelf and slope), GSL, and SS and slope regions, the CIL was defined as the subsurface layer (>25 m depth) bounded by the 0°C, 1°C, 4°C temperature thresholds, respectively, and in the GOM, different temperatures were used to define the upper (10°C) and lower (7°C) boundaries of the CIL. Each net tow was assigned a season relative to the initiation of the spring phytoplankton bloom in a corresponding sub-regional polygon, which was estimated from chlorophyll-a concentrations derived from ocean color measurements from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and the Moderate Resolution Imaging Spectroradiometer (MODIS) Aqua sensor. Light attenuation (diffuse attenuation coefficient Kd at 490 nm) was estimated for each sampling event based on binned satellite remote sensing observations from the Medium Resolution Imaging Spectrometer (MERIS), SeaWiFS, Visible and Infrared Imaging Radiometer Suite (VIIRS), Coastal and Ocean Colour Scanner (CZCS), and MODIS Aqua sensors. Data sources included in this data compilation and published references associated with each data set are provided in Supplementary Table S1 of Krumhansl et al. 2018. The dataset compiles data from the original sources in a common format. Variables that were not included or are not available for a station occupation are represented as blank cells. https://creativecommons.org/licenses/by/4.0/legalcode
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Calanus spp. and Metridia spp. size and lipid content metrics in the Northwest Atlantic, 1977-2020
PANGAEA
Helenius, Laura K; Head, Erica J H; Jekielek, Phoebe; Orphanides, Christopher D; Pepin, Pierre; Perrin, Geneviève; Plourde, Stéphane; Ringuette, Marc; Runge, Jeffrey A; Walsh, Harvey Joseph; Johnson, Catherine L — 2024 Measurements of body size (prosome length), dry weight, and lipid content (oil sac area and volume) in wild-caught copepods were compiled from multiple studies conducted in the northwest Atlantic between 1977 and 2020, across all months of the year. The merged dataset includes data from >150 field missions and time series stations sampled by Fisheries and Oceans Canada, National Oceanic and Atmospheric Administration, and academic institutions, with spatial coverage from the Gulf of Maine, Georges Bank, Nantucket Shoals, Scotian Shelf, Gulf of St. Lawrence, Labrador Sea, and the Newfoundland Shelf. The copepod species included in the data set are Calanus spp. (C. hyperboreus, C. glacialis, C. finmarchicus) and Metridia longa. Wild-collected copepods were sampled using a variety of plankton nets, as described in the metadata for each data point. This amalgamated historical dataset provides a large-scale perspective on copepod size and lipids across a large geographic and temporal range. Funding received from: - Fisheries and Oceans Canada- U.S. National Science Foundation- Maine Department of Marine Resources- U.S. Bureau of Ocean Energy Management (BOEM)- University of New Hampshire Coastal Ocean Observation and Analysis (COOA) Center- NOAA Fisheries Northeast Regional Action Plan https://creativecommons.org/licenses/by/4.0/legalcode
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Seawater carbonate chemistry and survival, metabolic traits and enzyme activities of multiple populations of the northern shrimp (Pandalus borealis)
PANGAEA
Guscelli, Ella; Noisette, Fanny; Chabot, Denis; Blier, Pierre U; Hansen, Tanya; Cassista-Da Ros, Manon; Pepin, Pierre; Skanes, Katherine R; Calosi, Piero — 2024 This study aimed at determining the physiological responses of the northern shrimp, Pandalus borealis, at different levels of biological organization and from four different geographic origins, exposed to elevated temperature and low pH to define its sensitivity to future ocean warming and acidification. Shrimp sampled within the northwest Atlantic were exposed for 30 days to combinations of three temperature (2, 6 or 10°C) and two pH levels (7.75 or 7.40). Survival, metabolic rates, whole-organism aerobic performance and cellular energetic capacity were assessed at the end of the exposure.This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from the PANGAEA dataset (see Source). In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-05-13.This project was further supported by:- Strategic Program for Ecosystem- Based Research and Advice grant (SPERA)- Aquatic Climate Change Adaptation Services Program grant (ACCASP)- MITACS-Ouranos Accelerate grant- Réal-Decoste Ouranos scholarship, Award no. 286109 https://creativecommons.org/licenses/by/4.0/legalcode
PANGAEA Logo
Depth-stratified abundance of Calanus spp. in the Northwest Atlantic (abundance per volume)
PANGAEA
Johnson, Catherine L; Krumhansl, Kira A; Head, Erica J H; Pepin, Pierre; Plourde, Stéphane; Record, Nicholas R; Runge, Jeffrey A; Casault, Benoit — 2024 This dataset includes depth-stratified, stage-specific Calanus spp. abundance (C. finmarchicus, C. glacialis and C. hyperboreus copepodites and adults) collected on the Newfoundland and Labrador Shelves (NL), in the Gulf of St. Lawrence (GSL), on the Scotian Shelf (SS), and in the Gulf of Maine (GOM). The data were collected under a variety of programs and compiled to describe northwest-Atlantic-wide patterns of Calanus spp. vertical distribution and assess their environmental drivers. The dataset spans years 2001 and 2006 for NL, 1994-2009 for GSL, 1997-2011 for SS, and 1978, 1995-2007, and 2016 for GOM. Sampling and data processing methods are summarized in Krumhansl et al. (2018). Calanus spp. abundance data are reported for a total of 531 distinct sampling events and a total of 2574 stratified net samples. Zooplankton samples were collected using different gear types, including Multinet, BIONESS and MOCNESS, with several configurations of mouth opening area ranging from 0.25 to 1 m², and with several net mesh sizes ranging from 150 to 335 µm. Calanus spp. abundance is reported in individuals/m² and in individuals/m³ for each depth layer of the stratified tows. The dataset also includes environmental metrics (temperature, salinity and density), where available, collected concurrently with the zooplankton net tows as well as parameters derived from ocean color remote sensing data. Temperature, salinity and density metrics were derived from CTD profiles collected either simultaneously with the net tows or from the sampling event nearest to the net occupations and within ±0.2° latitude and longitude and ±3 days. For each net in a station occupation, environmental metrics include the mean, minimum, and maximum temperature, salinity, and density values. For each station, metrics include the 0-50 m mean and near-bottom temperature, salinity, and density, the minimum subsurface temperature and its depth, depths of the upper and lower boundary of the cold intermediate layer (CIL) and its thickness, and the water temperature at the bottom of the CIL. For NL (shelf and slope), GSL, and SS and slope regions, the CIL was defined as the subsurface layer (>25 m depth) bounded by the 0°C, 1°C, 4°C temperature thresholds, respectively, and in the GOM, different temperatures were used to define the upper (10°C) and lower (7°C) boundaries of the CIL. Each net tow was assigned a season relative to the initiation of the spring phytoplankton bloom in a corresponding sub-regional polygon, which was estimated from chlorophyll-a concentrations derived from ocean color measurements from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and the Moderate Resolution Imaging Spectroradiometer (MODIS) Aqua sensor. Light attenuation (diffuse attenuation coefficient Kd at 490 nm) was estimated for each sampling event based on binned satellite remote sensing observations from the Medium Resolution Imaging Spectrometer (MERIS), SeaWiFS, Visible and Infrared Imaging Radiometer Suite (VIIRS), Coastal and Ocean Colour Scanner (CZCS), and MODIS Aqua sensors. Data sources included in this data compilation and published references associated with each data set are provided in Supplementary Table S1 of Krumhansl et al. 2018. The dataset compiles data from the original sources in a common format. Variables that were not included or are not available for a station occupation are represented as blank cells. https://creativecommons.org/licenses/by/4.0/legalcode

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(Author: Pepin, Pierre)

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