Additional file 2 of Decoding the RNA viromes in rodent lungs provides new insight into the origin and evolutionary patterns of rodent-borne pathogens in Mainland Southeast Asia
- Description:
- Additional file 1. Table S1. Samples of the 30 animal species used in this study and the countries (provinces) and dates of collection. Table S2. Overview of virus-associated reads. Table S3. Overview of sequence reads from mammal related viral families and unclassified RNA viruses. Table S4. Origin and accession number of viruses identified in this study. Table S5. Nucleotide sequence identity of novel rodent hantaviruses and known hantaviruses within the L, M, and S segment. Table S6. Nucleotide sequence identity of novel rodent PhleVs and known PhleVs within the L open reading frame. Table S7. Nucleotide sequence identity of novel rodent arenaviruses and known arenaviruses (AreV) in the L-, G- and N-encoding regions. Table S8. Nucleotide sequence identity of novel rodent rhabdoviruses and known rhabdoviruses (RhaV) in the L protein-encoding regions. Table S9. Nucleotide sequence identity of novel rodent paramyxoviruses and known paramyxoviruses (ParaV) in the L protein-encoding regions. Table S10. Nucleotide sequence identity of novel rodent and known hepaci-, pegi- and pestviruses. Table S11. ORF1b nucleotide sequence identity of novel rodent and known arteriviruses. Table S12. Nucleotide sequence identity of novel rodent and known coronaviruses (CoVs) in the RdRP-encoding region. Table S13. Nucleotide sequence identity of novel rodent and known hepeviruses (HEVs) in the ORF1 region. Table S14. Nucleotide sequence identity of novel rodent and known picornaviruses (PicoVs) in the RdRP-encoding region. Table S15. Nucleotide sequence identity of novel rodent and known astroviruses (AstroVs) in the RdRP-encoding region. Table S16. Nucleotide sequence identity of novel rodent unclassified RNA viruses and known viruses in the RdRP-encoding region.
- , , , , , , , , , , , , , , , , , , , , , , , , , , et Jin, Qi
- Dépôt source:
- Figshare
- Éditeur(s):
- figshare
- License:
- Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode
- URL:
- https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Decoding_the_RNA_viromes_in_rodent_lungs_provides_new_insight_into_the_origin_and_evolutionary_patterns_of_rodent-borne_pathogens_in_Mainland_Southeast_Asia/13627394
- Date de publication:
- 2021
- Sujets (en):
- Identificateur:
- https://doi.org/10.6084/m9.figshare.13627394
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