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Dreujou, Elliot; Beauchesne, David; Daigle, Rémi M; Carrière, Julie; Noisette, Fanny; McKindsey, Christopher W; Archambault, Philippe 2023-09-14 <h3>General presentation</h3> This repository presents the R code and associated data used in the article <em>Multiple human activities in coastal benthic ecosystems: introducing a metric of cumulative exposure</em>.<br><br> Datasets include information about the stations sampled at Sept-Îles (Québec, Canada) in 2017 and exposure indices. Data includes species biomass, density and taxonomy of benthic macrofaunal species, with physico-chemical parameters at the sediment surface, biotic indicators and exposure indices.<br><br> The main research questions were to: <ol> <li>model the exposure of benthic ecosystems to anthropogenic activities locally</li> <li>explore the links between benthic community diversity and anthropogenic exposure</li> </ol> <hr> <h3> Specific details</h3> <ul> <li>Variables, units and files are explained in files <strong>README.yml</strong> (this file is a basic text file formatted with a YAML language) and <strong>README.txt</strong>.</li> <li>Language and software used for the analyses: R (4.2), PRIMER-E (6)</li> </ul> <hr>
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Dreujou, Elliot; Christopher W McKindsey; Cindy Grant; Lisa Tréau de Coeli; Richard St-Louis; Philippe Archambault 2020-08-27 <h3>General presentation</h3> This repository present the R codes ans associated data used in the article <em>Biodiversity and habitat assessment of coastal benthic communities in a sub-Arctic industrial harbour area</em>.<br><br> Datasets include sampling information about the stations in Sept-Îles (Québec, Canada) sampled during three campaigns (2014, 2016, and 2017). Data includes density and taxonomy of benthic invertebrate species, with physico-chemical parameters and heavy metal concentrations at the surface of the sediment.<br><br> The main research questions were to: <ol> <li>describe coastal habitats and macrobenthic communities at Sept-Îles, in order to provide the first benthic ecological survey of the area</li> <li>evaluate the links between communities and abiotic variables (including heavy metals)</li> <li>detect the presence of similar benthic assemblages, along with their relationships with habitats</li> <li>evaluate how macrofaunal size range will influence community descriptions and relationships with habitat parameters</li> </ol> <hr> <h3>Specific details</h3> <ul> <li>Variables, units and files are explained in files <strong>README.yml</strong> (this file is a basic text file formatted with a YAML language) and <strong>README.txt</strong>.</li> <li>Language and software used for the analyses: R (4.0.2), PRIMER-E (6)</li> </ul> <hr>
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Dreujou, Elliot; Desroy, Nicolas; Carrière, Julie; Tréau de Coeli, Lisa; McKindsey, Christopher W; Archambault, Philippe 2021-03-23 <h3>General presentation</h3> This repository presents the R code and associated data used in the article <em>Determining the ecological status of benthic coastal communities: a case study in an anthropized sub-Arctic area</em>.<br><br> Datasets include information about the stations sampled at Sept-Îles (Québec, Canada) in 2017. Data includes species biomass, density, taxonomy and traits of benthic macrofaunal species, with physico-chemical parameters at the sediment surface.<br><br> The main research questions were to: <ol> <li>compare outcomes of various benthic environmental indicators</li> <li>understand how these indicators relate to habitat parameters for validation and to select appropriate applications</li> </ol> <hr> <h3> Specific details</h3> <ul> <li>Variables, units and files are explained in files <strong>README.yml</strong> (this file is a basic text file formatted with a YAML language) and <strong>README.txt</strong>.</li> <li>Language and software used for the analyses: R (4.0.3)</li> </ul> <hr>